Publications

• Site-specific sulfations regulate the physicochemical properties of papillomavirus-heparan sulfate interactions for entry

F. Bano, L. Soria-Martinez, D. van Bodegraven, K. Thorsteinsson, A. M. Brown, I. Fels, N. L. Snyder, M. Bally, M. Schelhaas

BioRxiv 2024-02

• Variant-specific interactions at the plasma membrane: Heparan sulfate’s impact on SARS-CoV-2 binding kinetics

D.V. Conca, F. Bano, N. Mistry, J. von Wirén, L. Scherrer, J. Svirelis, K. Thorsteinsson, A. Dahlin, M. Bally

BioRxiv 2024-01

• Efficient clathrin-mediated entry of enteric adenoviruses in human duodenal cells

M. Becker, D.V. Conca, N. Dorma, N. Mistry, E. Hahlin, L. Frängsmyr, M. Bally, N. Arnberg, G. Gerold

Journal of Virology 2023, 97(10), e0077023

• Structure and role of O-linked glycans in viral envelope proteins

S Olofsson, M. Bally, E. Trybala, T. Bergström

Annurev. Virology 2023, 10, 283

• Simultaneous membrane and RNA binding by tick-borne encephalitis virus capsid protein

L. I. A. Pulkkinen, S. V. Barrass, M. Lindgren, H. Pace, A. K. Överby, M. Anastasina, M. Bally, R. Lundmark, S. J. Butcher

PLOS Pathogens, 2023, 19(2), e1011125

• Recruitment of apolipoprotein E facilitates Herpes simplex virus 1 release

L. Liu, K. Thorsteinsson, S. W. Jayaweera, D. Avinens, F. Bano, D. Conca, H. Lövheim, A. Olofsson, M. Bally

BioRxiv, 2023-02

• Cellular Chondroitin Sulfate and the Mucin-like Domain of Viral Glycoprotein C Promote Diffusion of Herpes Simplex Virus 1 While Heparan Sulfate Restricts Mobility

Y. Abidine, L. Liu, O. Wallén, E. Trybala, S. Olofsson, T. Bergström and M. Bally

Viruses, 2022, 14, 8, 1836

• Membrane insertion mechanism of the caveola coat protein Cavin1

K-C Liu, H. Pace, E. Larsson, S. Hossain, A. Kabedev, A. Shukla, V. Jerschabek, J. Mohan, C. A. S. Bergstroem, M. Bally, C. Schwieger, M. Hubert, and R. Lundmark

PNAS, 2022, 119, 25, e2202295119

• Dissimilar Deformation of Fluid- and Gel-Phase Liposomes upon Multivalent Interaction with Cell Membrane Mimics Revealed Using Dual-Wavelength Surface Plasmon Resonance

K. Norling, M. Sjöberg, M. Bally, V.P. Zhdanov, N. Parveen, and F. Höök

Langmuir, 2022, 38, 8, 2550–2560

• Protein-lipid interaction at low pH induces oligomerization of the MakA cytotoxin from Vibrio cholerae

A. Nadeem, A. Berg, H. Pace, A. Alam, E. Toh, J. Ådén, N. Zlatkov, S.L. Myint, K. Persson, G. Gröbner, A. Sjöstedt, M. Bally, J. Barandun, B.E. Uhlin, S.N. Wai

eLife, 2022, 11:e73439

• A tripartite cytolytic toxin formed by Vibrio cholerae proteins with flagellum-facilitated secretion

A. Nadeem, R. Nagampalli, E. Toh, A. Alam, S.L. Myint, T.V. Heidler, M. Dongre, N. Zlatkov, H. Pace, F. Bano, A.s Sjöstedt, M. Bally, B.E. Uhlin, S.N. Wai and K. Persson

PNAS, 2021, 118 (47), e2111418118.

• Physicochemical tools for studying virus interactions with targeted cell membranes in a molecular and spatiotemporally resolved context

M. Bally, S. Block, F. Höök, G. Larson, N. Parveen and G.E. Rydell

 Anal Bioanal Chem, 2021, 413, 7157–7178

• The Phosphatidylserine Receptor TIM-1 Enhances Authentic Chikungunya Virus Cell Entry

J. Kirui, Y. Abidine, A. Lenman, K. Islam, Y.-D. Gwon, L. Lasswitz, M. Evander, M. Bally and G. Gerold

Cells, 2021, 10, 1828.

• Herpes Simplex Virus Type 2 Mucin-Like Glycoprotein mgG Promotes Virus Release from the Surface of Infected Cells

E. Trybala, N. Peerboom, B. Adamiak, M. Krzyzowska, J.Å. Liljeqvist, M. Bally and T. Bergström

Viruses, 2021, 13(5), 887

• The ESCRT-III isoforms CHMP2A and CHMP2B display different effects on membranes upon polymerization

M. Alqabandi, N. de Franceschi, S. Maity, N. Miguet, M. Bally, W.H. Roos, W. Weissenhorn, P. Bassereau and S. Mangenot

BMC Biology, 2021, 19:66

• Phosphatidic acid-mediated binding and mammalian cell internalization of the Vibrio cholerae cytotoxin MakA

A. Nadeem, A. Alam, E. TohI, S.L. Myint, Z. Rehman, T. Liu, M. Bally, A. Arnqvist, H. Wang, J. ZhuI, K. Persson, B.E. Uhlin, S.N. Wai

PLoS Pathog, 2021, 17(3):e1009414

• A vaccine combination of lipid nanoparticles and a choleratoxin adjuvant derivative greatly improves lung protectionagainst inuenza virus infection

V. Bernasconi, K. Norling, I. Gribonika, L.C. Ong, S. Burazerovic, N. Parveen, K. Schön, A. Stensson, M. Bally, G. Larson, F. Höök and Nils Lycke

Mucosal Immunology, 2021, 14:523-536

• FRET-Based Assay for the Quantification of Extracellular Vesicles and Other Vesicles of Complex Composition

K. Thorsteinsson, E. Olsén, E. Schmidt, H. Pace, M. Bally

Analytical Chemistry, 2020, 92, 15336-15343

• Histo-blood group antigens of glycosphingolipids predict susceptibility of human intestinal enteroids to norovirus infection

I. Rimkute, K. Thorsteinsson, M. Henricsson, V.R. Tenge, X Yu, S.-C. Lin, K. Haga, R.L. Atmar, N. Lycke, J. Nilsson, M.K. Estes,
M. Bally, G. Larson

Journal of Biological Chemistry, 2020

• Independent Size and Fluorescence Emission Determination of Individual Biological Nanoparticles Reveals that Lipophilic Dye Incorporation Does Not Scale with Particle Size

S. Jõemetsa, P. Joyce, Q. Lubart, M. Mapar, E. Celauro, B. Agnarsson, S. Block, M. Bally, E.K. Esbjörner, G.D.M. Jeffries, F. Höök

Langmuir, 2020, 36, 9693−9700

• Lipid vesicle composition influences the incorporation and fluorescence properties of the lipophilic sulphonated carbocyanine dye SP-DiO

Q. Lubart, JK. Hannestad, H. Pace, D. Fjällborg, D. Westerlund, EK. Ebjörner, M. Bally

Physical Chemistry Chemical Physics, 2020

• Gel Phase 1,2-Distearoyl-sn-glycero-3-phosphocholine-Based Liposomes Are Superior to Fluid Phase Liposomes at Augmenting Both Antigen Presentation on Major Histocompatibility Complex Class II and Costimulatory Molecule Display by Dendritic Cells in Vitro

K. Norling, V. Bernasconi, V.A. Hernandez; N. Parveen, K. Edwards, N. Lycke, F. Höök, M. Bally

ACS Infect. 2019, Dis. 5, (11), 1867-1878

• Regulatory Mechanisms of the Mucin-Like Region on Herpes Simplex Virus during Cellular Attachment

M. Delguste, N. Peerboom, G. LeBrun, E. Trybala, S. Olofsson, T. Bergström, D. Alsteens, M. Bally

ACS Chem Biol. 2019, 14(3):534-542.

• Nanoplasmonic Sensor Detects Preferential Binding of IRSp53 to Negative Membrane Curvature

G. Emilsson, E. Röder, B. Malekian, K. Xiong, J. Manzi, F-C- Tsai, N-J. Cho, M. Bally, A. Dahlin

Frontiers in Chemistry, 2019, Vol. 7

• Bacteria‐Based Production of Thiol‐Clickable, Genetically Encoded Lipid Nanovesicles

J. Royes, O. Ilioaia , Q. Lubart, F. Angius , G. Dubacheva, M. Bally, B. Miroux, C. Tribet

Angewandte Chemie Int. Ed, 2019, 58(22), 7385-7399.

• Effective Refractive Index and Lipid Content of Extracellular Vesicles Revealed Using Optical Waveguide Scattering and Fluorescence Microscopy

D. L. M. Rupert, M. Mapar, G. V. Shelke, K. Norling, M. Elmeskog, J. O. Lötvall, S. Block , M. Bally, B. Agnarsson, F. Höök

Langmuir, 2018, 34 (29), 8522–8531

• Cell Membrane Derived Platform To Study Virus Binding Kinetics and Diffusion with Single Particle Sensitivity.

N. Peerboom, E. Schmidt, E. Trybala, S. Block, T. Bergström, H. Pace and M. Bally

ACS Infect. Dis., 2018, 4 (6), 944–953

• Binding kinetics and lateral mobility of herpes simplex virus type 1 on end-grafted sulfated glycosaminoglycans

N. Peerboom, S. Block, N. Altgärde, O. Wahlsten, S. Möller, M. Schnabelrauch, T. Bergström and M. Bally

Biophysical Journal 113, 2017, 1223–1234.

• Histo-blood group antigen presentation is critical for norovirus VLP binding to glycosphingolipids in membranes

W. Nasir, M. Frank, A. Kunze, M. Bally, V. P. Zhdanov, F. Parra, P-G Nyholm, F. Höök, G. Larson

ACS Chemical Biology, 2017, 12(5):1288-1296.

• A nano flow cytometer for single lipid vesicle analysis

R. Friedrich, S. Block, M. Alizadehheidari, S. Heider, J. Fritzsche, E. K. Esbjörner, F. Westerlund, M. Bally

Lab on a chip, 2017, 830-841

• The Matrix protein M1 from influenza C virus induces tubular membrane invaginations in an in vitro cell membrane model

D. Saletti, J. Radzimanowski, G. Effantin, S. Mangenot, W. Weissenhorn P. Bassereau, M. Bally

Scientific Reports, 2017, 7, 40801.

• Dual-Wavelength Surface Plasmon Resonance for Determining the Size and Concentration of Sub-Populations of Extracellular Vesicles

D. L. M. Rupert, G. V. Shelke G. Emilsson, V. Claudio, S. Block, C. Lässer, A. Dahlin, J. O. Lötvall, M. Bally, V. P. Zhdanov and F. Höök

Analyical Chemistry, 2017, 88 (20), 9980–998.

• Liposomes and lipid bilayers in biosensors

F. Mazur, M. Bally, B. Städler, R. Chandrawati

Advances in Colloid and Interface Science, 2017, 249, 288-299.

• Mucosal vaccine development based on liposome technology

V. Bernasconi, K. Norling, M. Bally, F. Höök, N. Lycke

Journal of Immunology Research, 2016, 5482087.

• Methods for the quantification and physical characterization of cell-derived vesicles and exosomes in biological samples
  

D. Rupert, V. Claudio, C. Lässer, M. Bally

Biochimica et Biophysica Acta – general subjects, 2016, 1861(1), 3164–3179.

• Evanescent Light Scattering Microscopy for Label-Free Interfacial Imaging: From Single Sub 100 nm Vesicles to Live Cells

B. Agnarsson, A. Lundgren, A. Gunnarsson, M. Rabe, A. Kunze, M. Mapar, L. Simonsson, M. Bally, V. Zhdanov, F. Höök

ACSnano, 2015, 9 (12), 11849–11862.

• Location-specific nanoplasmonic sensing of biomolecular binding to lipid membranes with negative curvature

J. Junesch, G. Emilsson, K. Xiong, S. Kumar, T. Sannomiya, H. Pace, J. Vörös, S-H. Oh, M. Bally, A. Dahlin

Nanoscale, 2015, 7, 15080–15085.

• Mucin-like region of herpes simplex virus type 1 attachment protein gC modulates the virus-glycosaminoglycan interaction

N. Altgärde, C. Eriksson, N. Peerboom, T. Phan-Xuan, S. Moeller, M. Schnabelrauch, S. Svedhem, E. Trybala, T. Bergström, M. Bally.

Journal of Biological Chemistry, 2015, 290, 35, 21473-21485.

• Interaction of Virus-like Particles with Vesicles Containing Glycolipids: Kinetics of Detachment

W. Nasir, M. Bally, V. Zhdanov, G. Larson, F. Höök;

Journal of Physical Chemistry B, 2015, 19(35), 11466-11472.

• Osteoblast-derived WNT16 represses osteoclastogenesis and prevent cortical bone fragility fractures

S. Movérare-Skritc, P. Henning, X. Liu, K. Nagano, H. Saito, A. Börjesson, K. Sjögren, S. Windahl, H. Farman, B. Kindlund, C. Engdahl, A. Koskela, F.-P. Zhang, E. Eriksson, F. Zaman, A. Hammarstedt, H. Isaksson, M. Bally, A. Kassem, C. Lindholm, O. Sandberg, P. Aspenberg, L. Sävendahl, J. Feng, J. Tuckermann, J. Tuukkanen, M. Poutanen, R. Baron, U. Lerner, F. Gori, C. Ohlsson

Nature Medicine, 2014, 20, 1279-1288.

• Determination of Exosome Concentration in Solution Using Surface Plasmon Resonance Spectroscopy

D. Rupert, C. Lässer, M. Eldh, S. Block, V. Zhdanov, J. Lötvall, M. Bally, F. Höök

Analytical Chemistry, 2014, 86(12), 5929- 5936.

• Parvovirus B19 VLP recognizes globoside in supported lipid bilayers

W. Nasir, J. Nilsson, S. Olofsson, M. Bally, G. Rydell

Virology, 2014, 456, 364-369.

• Equilibrium fluctuation analysis of single binding events reveals that cholesterol modulates ultra-weak Ca2+-mediated Lex-Lex interactions between glycosphingolipids in lipid membranes

A. Kunze, M. Bally, F. Höök, G. Larson

Scientific Reports, 2013, 3, 1452.

• A virus biosensor with single virus-particle sensitivity based on fluorescent vesicle labels and equilibrium fluctuation analysis

M. Bally, M. Graule, F. Parra, G. Larson, F. Höök

Biointerphases, 2013, 8(4).

• Norovirus GII.4 virus-like particles recognize galactosylceramides in microdomains of planar supported lipid bilayers

M. Bally, G. Rydell, R. Zahn, W. Nasir, M. Breimer, L. Svensson, F. Höök, G. Larson

Angewandte Chemie Int. Ed., 2012, 51(48), 12020-12024.

• Time-resolved Surface Enhanced Ellipsometric Contrast Imaging for Label-free analysis of Biomolecular Recognition Reactions on Glycolipid Domains

A. Gunnarsson, M. Bally, P. Jönsson, N. Médard, F. Höök

Analytical Chemisty, 2012, 84, 15, 6538-6545.

• Interaction of virions with membrane glycolipids

M. Bally, K. Dimitrievski, V. Zhdanov, F. Höök

Physical Biology, 2012, 9, 026011

• Interaction of Single Virus-like Particles with Vesicles Containing Glycosphingolipids

M. Bally, A. Gunnarsson, L. Svensson, G. Larson, V. Zhdanov, F. Höök

Physical Review Letters, 2011, 107, 188103, highlighted in Focus: Physics 2011, 4, 87.